Syllabus


INSTRUCTOR: Neil Reese
OFFICE: NPB 249B
PHONE: 688-4568
OFFICE HOURS: Monday -1:30 TO 3:00 PM
                              Tuesdays and Thursdays - 3 to 5 PM
 

I am available during these hours, but if it is possible please make an appointment to insure that my time will be devoted to you. Appointments can also be made for almost any other time.


Course Location:

    Lectures/Journal Club - Sioux Falls Center for Continuing Education (Room 309)
    Recitation -  Sioux Falls Center for Continuing Education (Room 309) or by arrangement with Lecturer
    Colloquium - Data-Tel Classrooms on each campus


Course Objectives:

The goal of this class is to provide all participants with an understanding of modern concepts in plant physiology, especially with regard to the pathways and regulation of primary metabolism. We will focus primarily on discussions of current research in this field. Reading assignments will be made before discussion of any topic and I will briefly summarize the materials during the lecture period. Coverage of current topics will come mainly from the Annual Reviews of Plant Physiology and Molecular Biology. Students will provide presentations of the primary literature in using a Journal Club format. A text book, "Plant Physiology, Biochemistry and Molecular Biology" is available on 'Reserve' at the library. I strongly recommended it you, to provide needed background materials that will allow you to better appreciate the primary literature presented. Members of the class will be responsible for being well prepared to discuss the assigned readings and to express their views and opinions of materials presented.

This class has the potential to help all of us increase our understanding of plant physiology and primary plant metabolism. The quality and enjoyment of the educational experience provided by this class depend upon each of us contributing insights and opinions to a lively debate of the current concepts and hypotheses in this field. Each of us has different training and
experiences that can add new dimensions to class discussions.



Format:

The course will consist of four integrated components:

1. Lecture

2. Journal Club

3. Recitation

4. Colloquium

The Lecture portion of the class will involve assigned readings covering the topics listed below. Most of these materials will be on reserve and consist of recent review and primary research articles. I will present a brief overview of the material and lead the discussion.

The Journal Club portion of the class will allow each student to select recent papers under general topic headings and to present the findings of the authors. The student will then lead the class discussion of the work.

The Recitation will provide a period to discuss modern research techniques and current research of class participants.

The Colloquium is a unique aspect of the Plant Systems class format, linking the Physiology, Molecular Stress and Environmental Stress Modules. Selected papers dealing with topics that bridge all three modules be discussed during the semester in an informal weekly meeting. All faculty and student participants will be expected to contribute to the discussions, with questions and insights unique to their fields of expertise.



Topics to be discussed in the Physiology Module:
 

I. The Plant Genome

    A. Nuclear
    B. Plastid
    C. Mitochondrial
    D. Exchange of genes and gene products
 
II. Plastid Structure

    A. Non-green plastids
    B. Chloroplasts
 
III. Photosynthesis

    A. Formation of ATP and Reducing power
    B. Rubisco
    C. Reductive pentose phosphate pathway
    D. C4 and CAM pathways
    E. Photorespiration
 
IV. Chloroplast-Cytosol Carbon Flux
 
V. Cytosolic Carbon Metabolism

    A. Carbohydrate synthesis
    B. Glycolysis
    C. Oxidative pentose pathway
 
VI. Mitochondrial Carbon Metabolism

    A. Mitochondrial structure
    B. Carbon oxidation
    C. Oxidation of NADH and ATP synthesis
    D. Alternate oxidative pathway
 
VII. Primary lipid metabolism

    A. Mitochondrial Pathways
    B. Chloroplast Pathways
    C. Microbodies



Grading:
 
1. Lecture Exams     50%
2. Journal Club        15%
3. Colloquium          15%
4. Recitation            10%
5. Participation        10%
 
The lecture exams will consist of 5 take-home assignments containing 1 or more questions that are to be answered in concise, well written, typed reports. The journal club evaluation will be based on your selection and presentation of timely journal articles (primary research only, no review articles). The Colloquium and Recitation evaluations will be based upon attendance and active participation in the weekly gatherings. Lastly, the participation grade will be based upon my assessment of your preparedness for class and participation in discussions. This portion of the grade is more than mere attendance, because your opinions, questions and ideas are essential to making this class worthwhile, and the ability to formulate and express opinions and ideas is indispensable to your development as successful professional biologists.